BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B09LP1|AL425075
(1021 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1512 1909 0.0
>3x_Contig1512
Length = 8803
Score = 1909 bits (958), Expect = 0.0
Identities = 1006/1022 (98%), Gaps = 4/1022 (0%)
Strand = Plus / Plus
Query: 1 aggagaggaagatggcgacgaataagaagtmgaggaggaagtagaaatcacagaagataa 60
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 2579 aggagaggaagatggcgacgaagaagaagtcgaggaggaagtagaaatcacagaagataa 2638
Query: 61 caacagaagatgaagatgctgatgaagawgcagatgacagcgttattgagaacagtgtta 120
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2639 caac-gaagatgaagatgctgatgaagatgcagatgacagcgttattgagaacagtgtta 2697
Query: 121 actttgatggcgtmatcaagtgtatgattgcagtcgcagatatcctaaattccgatacca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 actttgatggcgtcatcaagtgtatgattgcagtcgcagatatcctaaattccgatacca 2757
Query: 181 atttggtgaatgcwaatatcatatatgamaagacaggcttgatctgttgtgcaacgaaag 240
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2758 atttggtgaatgctaatatcatatatgacaagacaggcttgatctgttgtgcaacgaaag 2817
Query: 241 acatcaaggcaggggaacaagtttacaatatctacggtaatcatccaaactcgagagatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2818 acatcaaggcaggggaacaagtttacaatatctacggtaatcatccaaactcg-gagatc 2876
Query: 301 ttgagaaggtatggttatgttgaatggactggatccaaatacgattttggggaaawaacg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2877 ttgagaaggtatggttatgttgaatggactggatccaaatacgattttggggaagttacg 2936
Query: 361 awgaagaatatccatggactcactatcggagaagtataacgtcagcactgagtttttaga 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 ttgaagaatatcc-tggactcactatcggagaagtataacgtcagcactgagtttttaga 2995
Query: 421 tagagtagttgaaattttgagagaagatgagaagatcaaggaaatatgggattatgaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2996 tagagtagttgaaattttgagagaagatgagaagatcaaggaaatatgggattatgaaga 3055
Query: 481 tgttgtgctggatagctatgactgttatgcagatggtgaaacaattccagaagctgcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 tgttgtgctggatagctatgactgttatgcagatggtgaaacaattccagaagctgcatc 3115
Query: 541 aaccattcaaatcctattcgttcttttacagtcacatgaagtcgtaaagctggaggaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3116 aaccattcaaatcctattcgttcttttacagtcacatgaagtcgtaaagctggaggaatt 3175
Query: 601 agctttaactagactattacaaagaattgtgaagaagtgccaacaattactggaaagtgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3176 agctttaactagactattacaaagaattgtgaagaagtgccaacaattactggaaagtgg 3235
Query: 661 acgtgttacagaatctgttaattctatttggcagcaagcggtggagaagagattgaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3236 acgtgttacagaatctgttaattctatttggcagcaagcggtggagaagagattgaagat 3295
Query: 721 gtatccccaaaccaacccagttctttctgaagatagaattaaagagaccttcgcgaagtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3296 gtatccccaaaccaacccagttctttctgaagatagaattaaagagaccttcgcgaagtc 3355
Query: 781 taagagcgaccaaagacaactaatggcatcatgtattttagaatgtgaaagaagatgtat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3356 taagagcgaccaaagacaactaatggcatcatgtattttagaatgtgaaagaagatgtat 3415
Query: 841 tgcaaagtcgcgtgaagggataagtaaacaatttaaactattagatgacgagaaattatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3416 tgcaaagtcgcgtgaagggataagtaaacaatttaaactattagatgacgagaaattatt 3475
Query: 901 aaagaacgttttgaaaagaccagttgaagaggagaagaagaagaagagtagaatagttaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3476 aaagaacgttttgaaaagaccagttgaagaggagaagaagaagaagagtagaatagttaa 3535
Query: 961 aagagtcaaaaagaacagaaatgacgattaatcgctgatgctatttcc-aaawatgaaaa 1019
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 3536 aagagtcaaaaagaacagaaatgacgattaatcgctgatgctatttccaaaatatgaaaa 3595
Query: 1020 ag 1021
||
Sbjct: 3596 ag 3597
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9326
Number of Sequences: 1807
Number of extensions: 9326
Number of successful extensions: 270
Number of sequences better than 1.0e-20: 1
length of query: 1021
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1005
effective length of database: 10,329,639
effective search space: 10381287195
effective search space used: 10381287195
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)